 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Eucgr.F02171.1.p |
Common Name | EUGRSUZ_F02171, LOC104449203 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
Family |
bHLH |
Protein Properties |
Length: 369aa MW: 41188.5 Da PI: 4.6395 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.F02171.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.6 | 8.3e-12 | 202 | 245 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L
Eucgr.F02171.1.p 202 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYVKEL 245
589*********************66......****************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MEHYEQHGLL EELLGPQRSQ DHLFGTIPTE MNELSSNAWA FDHRCFGESS SLFSPSQPFP 60 VSPSQPFPVS LDQDDLNSLC FSFGNEYPFL QQPHMMSDSS YSPVTGPQFT DSSYSPHEID 120 AGVQEDQCPL NPLMQEDEPG PVPLLTVTDN FQSLNLQQAT CKIEPLHQES PAPPPVVFNM 180 GGSCLEGKSR ARKLEGQPSK NLMAERRRRK RLNDRLSMLR SIVPKISKMD RTSILGDTID 240 YVKELLDKIS SLQQESELDL KQLNVLAPLK EMKPNEMSVR NSPQFQVEKR NEDTKIEICC 300 AGKPGLLLST ISTMEALGLE IEHCVISCFN DFAIQASCSE GLEQRNLVSS EDMKQALFRN 360 AGYGGRCL*
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 204 | 211 | ERRRRKRL |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis. Development, 2016. 143(4): p. 682-90 [PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis. Plant Mol. Biol., 2017. 93(3): p. 299-311 [PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
|