PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.F01535.1.p | ||||||||
Common Name | EUGRSUZ_F01535 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 186aa MW: 21255.1 Da PI: 4.3888 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 37.6 | 6.6e-12 | 3 | 104 | 9 | 128 |
NAM 9 PtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 P+ eel +++ + ++ ++ +v+++v+ +++ P++L e+ wyf + ++k ++ g+Wk g+ +e++ + + +g Eucgr.F01535.1.p 3 PSTEELFTFFFCMPHADFA-PA-NVMTDVNPFDCLPQTLL------ENVWYFMDSMENK---------GAEGGFWKPRGEPREIFG-DASIKG 77 8888888888876655554.33.6899***********95......5678887766554.........4679**************.9999** PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 t fy+ + p+ ektdW+m ey + Eucgr.F01535.1.p 78 WEATHEFYEVQGPHVEKTDWLMLEYYI 104 *************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.261 | 1 | 127 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.12E-19 | 2 | 127 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.7E-6 | 3 | 103 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MCPSTEELFT FFFCMPHADF APANVMTDVN PFDCLPQTLL ENVWYFMDSM ENKGAEGGFW 60 KPRGEPREIF GDASIKGWEA THEFYEVQGP HVEKTDWLML EYYITTKVSR EALPAKDTKS 120 LCKVFCSSSL PPSDSEMPQN VAGTEFLTEN FINSLPPDNF NIPTKQQMQV RLTDFFVVAR 180 FFLRS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.F01535.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010060913.1 | 2e-85 | PREDICTED: uncharacterized protein LOC104448728 | ||||
TrEMBL | A0A059BPZ3 | 1e-136 | A0A059BPZ3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010064553.1 | 1e-126 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM13708 | 10 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 1e-13 | NAC domain containing protein 58 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.F01535.1.p |