PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F00114.1.p
Common NameEUGRSUZ_F00114
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 279aa    MW: 28218.7 Da    PI: 9.5646
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F00114.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00042105127123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ykC  Cgk F++   L  H  +H
  Eucgr.F00114.1.p 105 YKCAVCGKGFPSYQALGGHKASH 127
                       9***********99999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.367105132IPR007087Zinc finger, C2H2
PfamPF139121.0E-12105129IPR007087Zinc finger, C2H2
SMARTSM003550.037105127IPR015880Zinc finger, C2H2-like
SuperFamilySSF576672.7E-9105127No hitNo description
PROSITE patternPS000280107127IPR007087Zinc finger, C2H2
SuperFamilySSF576672.7E-9169196No hitNo description
PROSITE profilePS501579.411174196IPR007087Zinc finger, C2H2
PfamPF139123.6E-13174198IPR007087Zinc finger, C2H2
SMARTSM003550.19174196IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280176196IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MALEAINSPT AASAPFQFME EPLSSRFLEP LNKRKRSKRP HHPPSEDEYL ALCLIMLARS  60
GAAPKPNHHA SPAPLPPPPP PAPTKPEEAA ATATATAAPA NNLSYKCAVC GKGFPSYQAL  120
GGHKASHRKS AAAAAAAAAA AAASSAGADE PSTSATNSGG GAAAASSSGG GRSHECSICH  180
KSFPTGQALG GHKRCHYDGG ASGSANSGVT TSEGRPPQLR PERARAAGVP DRVHRVGRRR  240
GGEPPPLEEA ALLDAPEDQA LSRTVKSLPV LLGLALVN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13138NKRKRSKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F00114.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018732227.11e-103PREDICTED: zinc finger protein ZAT10
TrEMBLA0A059BJQ90.0A0A059BJQ9_EUCGR; Uncharacterized protein
STRINGXP_010059845.11e-102(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66182443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67450.12e-31zinc-finger protein 1