PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E04365.1.p | ||||||||
Common Name | EUGRSUZ_E04365, LOC104447742 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 230aa MW: 25195.9 Da PI: 9.3698 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36 | 1.2e-11 | 118 | 225 | 2 | 97 |
EEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDf 79 +k+l++sd + ++rl + ++f+++h + ++ +++++d + + ++ + ++ +sg+yvl++GW keFvk gL +gD Eucgr.E04365.1.p 118 KKKLKQSDPGHLSRLLIGRDFVTSHllrwmseemvrqvE--GGKGADVIVRDVDTcSEHRLVFVFWASSGSYVLKGGWiKEFVKRRGLAAGDE 208 699*************************99988887542..236779999998877777888888*************999************ PP EEEEE-SS.SEE..EEEEE CS B3 80 vvFkldgr.sefelvvkvf 97 v ++ + s +++++++ Eucgr.E04365.1.p 209 VGIYW--DpSASKFHFSLL 225 *9995..445554577665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 5.49E-14 | 116 | 225 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 7.53E-17 | 117 | 225 | No hit | No description |
SMART | SM01019 | 0.0044 | 117 | 228 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 4.2E-14 | 118 | 225 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 4.1E-8 | 119 | 223 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MKLIDFLGPA SPPIGSDVPK SQDEGAGDIS PAIVVAAREF FPLAPDQNTK EVGDPLRGIA 60 PTQRKRKSVA SLADAESLIV EKAVKYKRTR KGKGEDSGCD TEGVSTELVL LFDPYKIKKK 120 LKQSDPGHLS RLLIGRDFVT SHLLRWMSEE MVRQVEGGKG ADVIVRDVDT CSEHRLVFVF 180 WASSGSYVLK GGWIKEFVKR RGLAAGDEVG IYWDPSASKF HFSLLHKAN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 62 | 67 | QRKRKS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E04365.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058715.2 | 1e-147 | PREDICTED: putative B3 domain-containing protein At1g78640 | ||||
TrEMBL | A0A059CBK6 | 1e-165 | A0A059CBK6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010059748.1 | 1e-166 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 2e-27 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E04365.1.p |
Entrez Gene | 104447742 |