PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.C03807.1.p | ||||||||
Common Name | EUGRSUZ_C03807, LOC104438258 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 362aa MW: 39863.3 Da PI: 7.3255 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.3 | 0.00031 | 226 | 264 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq Eucgr.C03807.1.p 226 RKEKLGDRITALHQLVSPF-----GKTDTASVLAEAIGYIRFLQ 264 6678889999999999998.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.877 | 214 | 263 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.22E-10 | 224 | 274 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.64E-6 | 224 | 268 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.1E-8 | 228 | 270 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence Send to blast |
MHRVLQSSSP VQQQMMANPN SWWNINSLRA PSPQQATSST FFPNIPPYHH SNLFPQYMPT 60 NPSSALAASW LENSSQEHQQ LQAESWGQLL LGGLVSEEDK NVLTQFQAKR LENWGDQQVL 120 EQSPVDVKQE NSSSSYLYGH ATREDFHGSK SAVWPTTTLT PAASPPKSCV TSFSSNLLDF 180 SYKKSDGNKH PVPDQSSECK SSATGGAQKK ARTQPSSAQS TTFKVRKEKL GDRITALHQL 240 VSPFGKTDTA SVLAEAIGYI RFLQNQIEAL SLPYLGNGSG NMRHQQTVQR ERNCIFPEDP 300 GQLLNDNCMK RKGALDQDTN HEEAKDLRSR GLCLVPIQCT MQVGNETGAD YWAPAIGGGF 360 H* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.C03807.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010049661.1 | 0.0 | PREDICTED: transcription factor bHLH68 | ||||
Swissprot | Q8S3D1 | 1e-87 | BH068_ARATH; Transcription factor bHLH68 | ||||
TrEMBL | A0A059CVK9 | 0.0 | A0A059CVK9_EUCGR; Uncharacterized protein | ||||
STRING | XP_010049661.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1872 | 28 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 7e-89 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.C03807.1.p |
Entrez Gene | 104438258 |
Publications ? help Back to Top | |||
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