PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.A02250.1.p | ||||||||
Common Name | EUGRSUZ_A02250 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 242aa MW: 26903.7 Da PI: 7.308 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 49 | 1.1e-15 | 48 | 100 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iNs ++ Lr+llP+a + +Kls +++ ++ +YI +Lq Eucgr.A02250.1.p 48 KKLNHNACERDRRKKINSLYSALRSLLPSA--DQTEKLSIPATVSQVLKYIPELQ 100 6789*************************5..599*****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.929 | 47 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.10E-13 | 48 | 104 | No hit | No description |
SuperFamily | SSF47459 | 1.83E-16 | 48 | 118 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.2E-13 | 48 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.0E-14 | 48 | 119 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.6E-11 | 53 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010106 | Biological Process | cellular response to iron ion starvation | ||||
GO:0055072 | Biological Process | iron ion homeostasis | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MRRDAHPFSS PPPLHFAFLS SPSPHAEVVL DHLNIPAAAT NGEATMVKKL NHNACERDRR 60 KKINSLYSAL RSLLPSADQT EKLSIPATVS QVLKYIPELQ QQVQILARER EELLSRINAT 120 QGIDDCTHQE ISKGKGALSN PMPSISTNCL SESEVAIQIC TTKVMTQNTV DFSEILLNLD 180 HHGFPLISAS TFESFGGTRT TFYNLHVQVE RSRGMECEAL KEKLLALYDQ KGREVKFPIQ 240 H* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.A02250.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010023785.1 | 1e-180 | PREDICTED: transcription factor bHLH101 | ||||
TrEMBL | A0A059DH16 | 1e-179 | A0A059DH16_EUCGR; Uncharacterized protein | ||||
STRING | XP_010023785.1 | 1e-179 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM482 | 28 | 153 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 1e-40 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.A02250.1.p |