PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC049400.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 467aa    MW: 51086 Da    PI: 8.9612
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC049400.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.6e-10182223445
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                    k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  EcC049400.20 182 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 223
                   5889*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-8179242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415181225IPR004827Basic-leucine zipper domain
CDDcd147081.57E-21183235No hitNo description
PfamPF001704.2E-7183223IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-6183226No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-7184227No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141443.8E-31266340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MGSRTRVGGG GDDGRVVNGM PSFVPQLPTS NSMGSEGNSI RSSRITDFGT LEQSLGYRIE  60
DAVDLSRNPV FNQMKSSAQA LGADVQFGSL NKSLSSSDRN LSVNIVGSQT LSMHRESQSN  120
LVSIPGAHRE NWGDSTMADS SPRTDTSTDD TGDKNHRFEG GQLGVAAASD SSDRSKEKAT  180
DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRLKLTQLE QELQRARQQG IFISGSGEQS  240
HSMSGNGALA FDVEYARWLE EHNKVVNELR NAVNAHAGDT ELRTIVDNVA AHFDEIFKLK  300
GTAAKADVFH ILSGMWKTPA ERCFMWIGGF RSSEVLKLLV NQLEPLTEQQ LVGIGNLQQS  360
SQQAEDALSQ GLEALQQSLA ETLANSTPAA GPSGNVANYM GQMAMAMGKL GTLEGFLRQA  420
DNLRQQTLQQ MHRVLTTRQS ARALLAINDY FSRLRALSSL WLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055972.10.0PREDICTED: transcription factor TGA2.3
RefseqXP_010055976.10.0PREDICTED: transcription factor TGA2.3
RefseqXP_010055985.10.0PREDICTED: transcription factor TGA2.3
RefseqXP_010055993.10.0PREDICTED: transcription factor TGA2.3
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A059DHK90.0A0A059DHK9_EUCGR; Uncharacterized protein
STRINGXP_010055972.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-153bZIP family protein