PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC029930.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 349aa    MW: 38908.6 Da    PI: 3.863
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC029930.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.82.9e-12181198128
           NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104
                    P+ eel +++ +   ++   ++ +vi++v+ +++ P++L+       + wyf  + ++         + t+ g+Wk  g+ +e++  + + +g   
  EcC029930.40  18 CPSTEELFTFFFCMPHADFA-PA-NVITDVNPFDCLPQTLQ-------NVWYFMDSMEN---------KGTEGGFWKPRGEPREIFG-DASIKGWEA 95 
                   58999999888887666555.34.68**************6.......56888766544.........56899**************.9999***** PP

           NAM 105 tLvfykgrapkgektdWvmheyrl 128
                   t  fy+ + p+ ektdW+m ey +
  EcC029930.40  96 THEFYEVQGPQVEKTDWLMLEYYI 119
                   **********************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.86711135IPR003441NAC domain
PfamPF023652.1E-617118IPR003441NAC domain
SuperFamilySSF1019413.66E-1618125IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
RSLFAEKFLL SPILLEMCPS TEELFTFFFC MPHADFAPAN VITDVNPFDC LPQTLQNVWY  60
FMDSMENKGT EGGFWKPRGE PREIFGDASI KGWEATHEFY EVQGPQVEKT DWLMLEYYIT  120
TKVSREALPA KVLPESHVVY ANSLMHFSSP PPPPTPSSLI ILPLDGQFGL DFVQDTKSLC  180
KVFCSSSLPP SDSEMPQNVA GTEFLTENFI NSLPPDNFNI PTKQQVQVDT TSRNMMQRAD  240
SLLLSHPVEN LPELDIIDPD DYIALDELEF IDDDVYLGLS DLDIPESPPS DSDDSSCVTM  300
LSDECFNYLD AMLGLVAESG DHVEHKDGGC NFGVSDSSKP DDVVQTAIS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060913.11e-116PREDICTED: uncharacterized protein LOC104448728
TrEMBLA0A059BP341e-115A0A059BP34_EUCGR; Uncharacterized protein
STRINGXP_010064553.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.14e-13NAC domain containing protein 58