PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT29602
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 474aa    MW: 50426.2 Da    PI: 6.1934
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT29602genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10341383552
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
       HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 
               h + ErrRR+r+N++fe Lr llP+       K +Ka++L  + +Y++
  EMT29602 341 HMISERRRRERLNESFEALRGLLPPG-----SKKDKATVLANTLDYMN 383
               8899********************95.....499************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.097336385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.16E-16338407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-14340406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-8341383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.8E-11342391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.30E-4351385No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MDETSTTAAT TNHHRSSTSG GNGGHRGGDL SACRFGNMMD TLFVLGQESR LRILQQAASR  60
VPACAYLCVW APIPAGGHRP TPPFTAANRA RRQLLCLDAW LGDGGSGDVD RERALFDAYR  120
GSLCAAVSGC VPGWAYEDGR AYMELSEHEL AASASSPVQL QFYQEAGIKV AAFMGCESGE  180
IEVGMSTPAG QMNLQVGLGQ IFSEDFFQQS LLEELLQLPP TRPSSSSSSL PSISVDSPAD  240
GSTSLLRTMA MSSSTTTSPR DLTAAPLPPP APSAASRAHL AGTAPAHVHG HVPLPRAPEA  300
DDVAMAQAML AERTTGTTTQ RWREEDEEAA PPAPTSSQLH HMISERRRRE RLNESFEALR  360
GLLPPGSKKD KATVLANTLD YMNILIAQIS ELEARNRNLE TAAQHQRITN GNSRDRPDQA  420
ALQAGGSSKR VQVEVATGSA GASTSSSSFS TGQCREVTNN GGHDLILAWN KLPL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1344349ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3617110.0AK361711.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1146P09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155039.11e-150putative transcription factor bHLH041
TrEMBLM8CPZ00.0M8CPZ0_AEGTA; Putative transcription factor bHLH041
STRINGEMT296020.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39773367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-13bHLH family protein