PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT28823
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 488aa    MW: 54045.5 Da    PI: 7.1478
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT28823genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM86.35.6e-271292731128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........tksgyWkat 86 
               lp+G++F+Pt  el+ e+L+ kv + +    ++ +   i+e+ +i++++P++Lp  +k + ++ +fF+k +++y  g+rk+r+           + +W++t
  EMT28823 129 LPAGVKFDPTGLELL-EHLEGKVGRVPshdlIDDFIPtIEEAeGICYTHPKNLP-GTKMDGRNNHFFHKISNAYDVGQRKRRKisnsdhvvcDVHFRWHKT 227
               799************.99*****999975553333334888878**********.445678999******************856666665433677**** PP

       NAM  87 gkdkevlskkgelvglkktLvfykgrapkge....ktdWvmheyrl 128
               gk+ke+l+++g  +g kk+Lv+   ++++g     kt+W+mh+y+l
  EMT28823 228 GKSKEILDNNGVIKGWKKILVLNMHSRKDGItsrtKTNWTMHQYHL 273
               **********************9655554433333*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-30120292IPR003441NAC domain
PROSITE profilePS5100525.862129292IPR003441NAC domain
PfamPF023651.4E-10130273IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MTSVLASVVL ISLHRNDNLW GIPWELVYVL ASLAPKRKVS LPTPVGALLA PLVMAYVTTR  60
LVTLGGEPRS IRPSGGPREA KMITKIDLSH RFISSLVTTV VAVIRNPTHP PPSHIECPNC  120
KYHIDWPGLP AGVKFDPTGL ELLEHLEGKV GRVPSHDLID DFIPTIEEAE GICYTHPKNL  180
PGTKMDGRNN HFFHKISNAY DVGQRKRRKI SNSDHVVCDV HFRWHKTGKS KEILDNNGVI  240
KGWKKILVLN MHSRKDGITS RTKTNWTMHQ YHLGVDQDEK HGELVVSKVF YQPKKDEQPV  300
MCHVNEESDP FAGEIDPTTP MTYPPQPRPA NSSPSRTEQN QGEHAALSGP DERPSHGATP  360
DSVYPKMQPF PLVLDALQGL PDPRTPPGFS HMASWFAGTS SHSNALEDAP LSGLDERLPH  420
GGTLDAAYPD PEGQALPLDA EALQGFPNLG TPPDIFPQDL QFGSQDIFWG GGVLKQRRNE  480
KRLVFLVM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187628.10.0SUPPRESSOR OF GAMMA RESPONSE 1-like
TrEMBLM8C4340.0M8C434_AEGTA; NAC domain-containing protein 8
STRINGEMT288230.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.12e-56NAC family protein