PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27141
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HD-ZIP
Protein Properties Length: 214aa    MW: 23723.6 Da    PI: 8.353
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27141genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.27e-1995149256
               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
  Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
               rk+ ++t eq   Lee F+ ++ +s+ e+ +LA++lgL+ rqV vWFqNrRa+ k
  EMT27141  95 RKKLRLTVEQAALLEESFRAHNVLSHGEKHDLARQLGLKPRQVEVWFQNRRARTK 149
               778899***********************************************98 PP
2HD-ZIP_I/II1131.9e-3695180186
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86 
                  +kk+rl+ eq++lLEesF++++ L++ +K++lar+Lgl+prqv+vWFqnrRARtk+kq+E d+e L+r++++l+++n+rL++e +e
     EMT27141  95 RKKLRLTVEQAALLEESFRAHNVLSHGEKHDLARQLGLKPRQVEVWFQNRRARTKLKQTELDCELLRRWCERLSDDNARLRRELAE 180
                  69*******************************************************************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-1874149IPR009057Homeodomain-like
SuperFamilySSF466892.22E-1879152IPR009057Homeodomain-like
PROSITE profilePS5007117.32991151IPR001356Homeobox domain
SMARTSM003899.3E-1693155IPR001356Homeobox domain
PfamPF000463.2E-1695149IPR001356Homeobox domain
CDDcd000864.08E-1395152No hitNo description
PRINTSPR000313.5E-6122131IPR000047Helix-turn-helix motif
PROSITE patternPS000270126149IPR017970Homeobox, conserved site
PRINTSPR000313.5E-6131147IPR000047Helix-turn-helix motif
SMARTSM003402.2E-12151192IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MEESQEVEEL VDTRLSLVIG AASRPPPTVL ALLPATSPEN EAAARRKRKG QENGAGGVAA  60
TSRQHSKRAK TVHDSSDVDD DDDDGGDAAR SDGTRKKLRL TVEQAALLEE SFRAHNVLSH  120
GEKHDLARQL GLKPRQVEVW FQNRRARTKL KQTELDCELL RRWCERLSDD NARLRRELAE  180
TLSSSPAFLS RLTMANDKAV CSSCNKLTSA RMPA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19399TRKKLRL
2143151RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189357.11e-154putative homeobox-leucine zipper protein HOX26
SwissprotQ67UX63e-44HOX26_ORYSJ; Putative homeobox-leucine zipper protein HOX26
TrEMBLA0A3B6QDN61e-153A0A3B6QDN6_WHEAT; Uncharacterized protein
STRINGTraes_6DS_17B737547.11e-154(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83153249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.12e-37homeobox from Arabidopsis thaliana