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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT26455 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
MYB |
Protein Properties |
Length: 389aa MW: 42145.1 Da PI: 6.9315 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT26455 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.3 | 2.3e-15 | 32 | 79 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+lv + + G g+W+ +ar g+ R++k+c++rw +yl
EMT26455 32 KGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYL 79
678*******************************************97 PP
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2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 85 | 128 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E++l+v++++ lG++ W+ Ia++++ gRt++++k++w++
EMT26455 85 RGAFSPQEEDLIVNLHAILGNR-WSQIAARLP-GRTDNEIKNFWNS 128
89********************.*********.***********97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MRKPVECPAT KCSGGAALGN SNVAAAAAKL RKGLWSPEED ERLVAYMLRS GQGSWSDVAR 60 NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEDLIVNLH AILGNRWSQI AARLPGRTDN 120 EIKNFWNSTI KKRLKMNSAA SSPATTECAS PPEPKLDGGS ASCLDLTSLE DGSHHGMKSM 180 WRMDSSSSSS SSSSIQQQSR PSTMAPAANR GYGGLLLPLP DQFCGIAPST HTSVPPFFHD 240 HSSFKQVSPL RTGGYYPHGM AMEGGGGCFM GEEAVGTGGE HSVLFNVPPL LEPMAVALQD 300 QTLMASTGNG DNNHRNTNST AEGTTLSSKN GCNINDDNNS KNNINSVVSY WEQHGHQQHM 360 SRNVVMGEWD LEELMKDVSC LPFLDFQVE
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY672068 | 0.0 | AY672068.1 Hordeum vulgare subsp. vulgare myb transcription factor mRNA, complete cds. |