 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT23269 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
MYB |
| Protein Properties |
Length: 308aa MW: 32869.7 Da PI: 5.5768 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT23269 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 53.2 | 6.8e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd +l+ + +G+g+W++++++ g++R++k+c++r+ +yl
EMT23269 14 KGPWTAEEDAKLLAYTSNHGTGNWTSVPQRAGLKRCGKSCRLRYTNYL 61
79********************************************97 PP
|
| 2 | Myb_DNA-binding | 53.5 | 5.4e-17 | 69 | 110 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
++T+eE+el+v ++++lG++ W++Ia+ ++ gRt++++k++w++
EMT23269 69 NFTQEEEELIVTLHAMLGSR-WSLIANQLP-GRTDNDVKNYWNT 110
89******************.*********.***********97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0048658 | Biological Process | anther wall tapetum development |
| GO:0052545 | Biological Process | callose localization |
| GO:0055046 | Biological Process | microgametogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MGRPPCCDKA NVKKGPWTAE EDAKLLAYTS NHGTGNWTSV PQRAGLKRCG KSCRLRYTNY 60
LRPNLKHENF TQEEEELIVT LHAMLGSRWS LIANQLPGRT DNDVKNYWNT KLSKKLRQRG 120
IDPITHRPIA DLMQSIGTLA IRPPPSAAGA SSSSYLPVNP PAAPGLQPLH DDVKYHTVLN 180
QQQQQVITLL DPDAPGAAAS PEHQLKWSDF LADDAAALEA APQVVLGQYQ EAAVAGGGAH 240
AYGDTDSTAA DGVGGGGDDS AASAFIDAML DSDKKMGVDQ LIADLLADPA YYYGGGSSSS 300
TSELGWGC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK372736 | 0.0 | AK372736.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3010N13. |
