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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT23019 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
TCP |
Protein Properties |
Length: 371aa MW: 38675.8 Da PI: 6.0957 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT23019 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 34.6 | 6.6e-11 | 31 | 105 | 18 | 104 |
TCP 18 RdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesssssasnsssgkaaksaakskksqks 103
R RR R s +c qd+LG+d++sk+++WL+++ak ++ l+ + ++++s+++++s +s++
EMT23019 31 RRRRKRSSTTC-------QDRLGYDRPSKAVDWLIKNAKDPVDTLATLpawqptavapassnaAAPPSSSTQPDSADNSDD-------------------- 104
55666666666.......799***************************555555444333322222222222222222221.................... PP
TCP 104 a 104
+
EMT23019 105 Q 105
1 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0030154 | Biological Process | cell differentiation |
GO:0045962 | Biological Process | positive regulation of development, heterochronic |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MDAHWSSSSS GGEAADGGSG SEAPPPGSSR RRRRKRSSTT CQDRLGYDRP SKAVDWLIKN 60 AKDPVDTLAT LPAWQPTAVA PASSNAAAPP SSSTQPDSAD NSDDQAQAIT IAHSSFDFAG 120 SGGAGGATGG ISFLPPSLDS DSIADTIKSF FPMGGTAGGE PSSSTVAAHS SAMGFQGYTP 180 DLLSRTGSQS QELRLSLQPL PDPMFHHHHH QQEQHRPDGH DGNGTAQQTL FPGAASYSFG 240 GGGAMWAEQA ASQRMMPWNV PDPGGGSTGG YLFNVSQQAA HMQAALSGQS QFFFQRGPLQ 300 SSNQPSDRGW PETVEADDNN PMQQQQQHQG GLNPSVSAIG FGPGVSFSGF RVPARMQGNE 360 EHNGGKSAPH H
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator. Binds the promoter core sequence 5'-GGNCC-3'. {ECO:0000269|PubMed:12000681}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK376641 | 0.0 | AK376641.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3129N09. |