PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

EMT22348

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

ERF

Protein Properties

Length: 217aa MW: 22592.8 Da PI: 6.7831

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT22348	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	26.9	1.2e-08	95	122	28	55
AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55 ++r+++g+f+ta eAa a++a +++++g EMT22348 95 KARVWIGTFDTAAEAAHAYDAEARRIHG 122 49************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	13.656	26	130	IPR001471	AP2/ERF domain
Pfam	PF00847	8.3E-5	85	122	IPR001471	AP2/ERF domain
SMART	SM00380	9.5E-8	85	136	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	4.77E-11	93	131	IPR016177	DNA-binding domain
Gene3D	G3DSA:3.30.730.10	1.4E-16	94	131	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MCGGKFATND RGKGRPGQSP SAGKAKMRGG WPTDEDSDDW EAAFREFVAA DDGDVLNEPL 60 PTGRSGAGPA LATRTAASGS GRGGGGRRKS ATPSKARVWI GTFDTAAEAA HAYDAEARRI 120 HGRKARTNFP AAPAAPYSDR PGPSSRSSVT DGGADNVARA TESASSSFKE LFKDVHGTAP 180 YDARILLECC SDDVMESLLA GSDMAGNMDL SSFRFPS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015610635.1	6e-21	ethylene-responsive transcription factor 1-like
TrEMBL	M8BKN2	1e-153	M8BKN2_AEGTA; Ethylene-responsive transcription factor 1
STRING	EMT22348	1e-154	(Aegilops tauschii)