PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | EMT21586 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 460aa MW: 49876 Da PI: 7.2448 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.8e-31 | 197 | 255 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ EMT21586 197 SDLWAWRKYGQKPIKGSPHPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 255 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 32.856 | 191 | 257 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.6E-31 | 194 | 257 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.01E-26 | 194 | 257 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.7E-38 | 196 | 256 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.2E-26 | 198 | 255 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 460 aa Download sequence Send to blast |
MAAADEATLK WAREDYAKME MERRHRALEE IAARRCGRDE GGVIFLVDSA DDAPPPPTKP 60 VRQGDAGQGC SKDGDNVKKE EADDGGDYSA FGAFFGLDQI GKSLKTKAMG HISESHARKQ 120 VVGLGATTNT PVEDFLRLQS GFPEVKKQNP HADAIRIGQE SGLGQPSRER KNQARKVVCI 180 PAPTTAGSRP TGEVVPSDLW AWRKYGQKPI KGSPHPRGYY RCSSSKGCSA RKQVERSRTD 240 PNMLVITYTS EHNHPWPTQR TARPGSTRSH HGKNGGGGGS GSGSKSSHNE KQTQNQNVKE 300 ERKDHRAAAT TTATTTTSTV TTTASTSPVV VKEETLAGSS SEAQARDQRA MDTVTGVLQQ 360 VDHRELMDQV FSESYRPMIP GSGQHHEDFF ADFADLAELE SDPMSLIFSK EYMEARPSGG 420 AGDHGGQEKA VAKELDPFDM LDWSTTSSTA GSTFEQGKRG |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 7e-24 | 172 | 258 | 3 | 80 | Disease resistance protein RRS1 |
5w3x_D | 7e-24 | 172 | 258 | 3 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020197882.1 | 0.0 | probable WRKY transcription factor 35 | ||||
TrEMBL | M8CEI1 | 0.0 | M8CEI1_AEGTA; Putative WRKY transcription factor 35 | ||||
STRING | EMT21586 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2592 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G34830.1 | 1e-56 | WRKY DNA-binding protein 35 |