PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20093
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 367aa    MW: 38851.2 Da    PI: 8.8421
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20093genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.3e-12250455
              HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
              +h ++Er+RR+++N+ ++ Lr+l+P++   ++ + + a+i+  A++++k+L+
  EMT20093  2 THIAVERNRRRQMNEYLAALRSLMPES---YAHRGDQASIVGGAIDFVKELE 50
              8**************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.964149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-16174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.52E-13154No hitNo description
PfamPF000104.8E-10250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-14268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-10455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MTHIAVERNR RRQMNEYLAA LRSLMPESYA HRGDQASIVG GAIDFVKELE QLLQSLEAQK  60
RTLLAQQQQD HKPPPIRDAM PSPSITVTAA ATTTTRSGSG EGKQAAATRD GMSPPFAGFF  120
TYPQFVCRLP PRDDADDHAG AADIEVTLVE THASVRVMAP RRPGQLLRMV AGMEALRLTV  180
LHLNVTTLGS LALYSLSVKV EEGCGLTTAD DIAASVHHVL CLVDAEATSQ RLLAGGQQEI  240
SSQRHAHLPP HDAAGQGRPM RSTVSKGPPA PASADVARSR PKLGRDAGCC WIWRTGAPSG  300
EPEAGVGRRT LPGSRLGTGV ATCAATSHAR VGSGAHGRDP MSVVKVPRVL ASVPAAEIRH  360
SVIAADV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020174319.11e-174transcription factor bHLH94-like
TrEMBLR7WDB40.0R7WDB4_AEGTA; Transcription factor bHLH96
STRINGEMT200930.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37123678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-55bHLH family protein