PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16151
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family Trihelix
Protein Properties Length: 485aa    MW: 52432.4 Da    PI: 6.8746
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16151genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix61.91.6e-19115231185
  trihelix   1 rWtkqevlaLiearremeerlrrgk...............................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
               +Wt+ +v++Li+++ + +e+ +  +                               ++k++W++vs++m e+gf++sp+qC++k+++lnkryk + +  ++
  EMT16151 115 KWTDAMVRLLIAVVYNAGEDGEGVSaggkaaashshgkavasaaaqgghgpqaaaqQRKGKWRSVSRAMVEKGFKVSPQQCEDKFNDLNKRYKGVVDLLGR 215
               7***********99966666664333345566667777777777888888888888********************************************* PP

  trihelix  71 rt.sessstcpyfdql 85 
               +t ++++ + +++d +
  EMT16151 216 GTaCDVVANPALLDTM 231
               9548888888888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.3E-16113258No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MERVDGRAGL GARGSAGAML GMEMHLVHQP QPQIHAASSF QQPPEHLPHA NGGFQVQHHQ  60
AMPMGQQHPP PSYGAYVAPP SRAVNAHEEE EMGNGIGAVQ QPGAGAAGCS WSRMKWTDAM  120
VRLLIAVVYN AGEDGEGVSA GGKAAASHSH GKAVASAAAQ GGHGPQAAAQ QRKGKWRSVS  180
RAMVEKGFKV SPQQCEDKFN DLNKRYKGVV DLLGRGTACD VVANPALLDT MGELTAKSKE  240
EARKMLRSKR LFFREMCNYH NPGGTATASH GIEGGAAANS SAGRQVVAMV NSSTRSEDDS  300
EDDVLSSKEA EEEEDDYDLD DVEEKAPGGH KNKRRLGESS AAAAGEDGEE NGNNKPARGR  360
PCTSMQQLKR ELAAAEAGGD QQQLRQLVQR RALELEKQEL AYEVQELALE KHRRRWEQFK  420
AKKEWNIEQE RQRIEGLRVD GKRMLLMLKQ KEFDLDHLPG AQTPPPGAAF QQQPGSSPST  480
TGQPN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163766.10.0uncharacterized protein LOC109749193
TrEMBLN1R3I00.0N1R3I0_AEGTA; Uncharacterized protein
STRINGEMT161510.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119443138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.13e-42sequence-specific DNA binding transcription factors