 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT15483 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
ERF |
| Protein Properties |
Length: 410aa MW: 44036.3 Da PI: 4.4478 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT15483 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60 | 5.7e-19 | 52 | 101 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g
EMT15483 52 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 101
789******.7*********33....35**********************99998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000302 | Biological Process | response to reactive oxygen species |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0035865 | Biological Process | cellular response to potassium ion |
| GO:0048528 | Biological Process | post-embryonic root development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MAMKRKLSPT EADLDSDDHH KPDTSSITTA TRPEPWAATV GAVATAQPAR KRFVGVRQRP 60
SGRWVAEIKD TIQKIRVWLG TFDTAEEAAR AYDEAACLLR GANTRTNFWP RAAAPAATSD 120
GHGGAGLAEN HGHLHHHTPP PSALPSKVTN LLLLRLKRAR SISDEHISAS ATAQEALGQQ 180
QQEQEEYGAG SFHVDDFLSY DSNVDEHGVV KYEEDSHCSR DAEDDEEDVS VEEEEAPLDF 240
GFMDTHPSPP GDVGDAGLFS PFEMMAAEIG GAVEAEAEAP EYGGGENENS AAIHEVMKRM 300
TYERKISASL YALSGVSECL RLRLGDVGHG LALSGLRDAC MKKRQEQNQE AVVDCVEGGH 360
EESSSSNSSS SSEVASCSPE AGISSPNADA VDSDVVMWSS LDLAPICFMS
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012620 | 1e-76 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |
