 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT11237 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
ERF |
| Protein Properties |
Length: 335aa MW: 36155.9 Da PI: 8.1296 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT11237 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 36.2 | 1.5e-11 | 102 | 149 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkk 52
s+++GV+ +k g+W+A+I +k ++lg ++t+ +Aaka+++a++
EMT11237 102 SRFRGVTLHK-CGKWEARIGQlM----GKKFVYLGLYDTEMDAAKAYDKAALD 149
789*******.7******77733....25**********77*********986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MATAKLPRSL RKPSSLDLAL ISISRLCFLD LQGLREAGGF DTAQAAARAY DQAAIKFRGV 60
EADINFVLDD YKEDIGKMSV LSKEELVQVL RRQGAGFVRG SSRFRGVTLH KCGKWEARIG 120
QLMGKKFVYL GLYDTEMDAA KAYDKAALDC SGEEAVTNFE PKAAVTCDSN LGLQAWDGEP 180
DLELSLGCSG GGDPSMVTGG KTLHTAATPG SRRTSLTFEM PEEEEAAAPW RPGRNRSIWM 240
RPSPTSITPA LRCPDGDHRP TIPRSSMLQM GQIGGAGRAE PHMLGWPTGA GVDRWQPYAA 300
EAAAAASSGF PPAPGLGGVQ RQNHHRPGSR EQLWR
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor (By similarity). Involved in spikelet transition. Prevents lemma and palea elongation as well as grain growth (By similarity). {ECO:0000250|UniProtKB:A0A0N7KMH0, ECO:0000250|UniProtKB:P47927}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK357393 | 0.0 | AK357393.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1052F01. |
