 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT09773 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
Family |
MYB |
Protein Properties |
Length: 285aa MW: 31353.7 Da PI: 5.7866 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT09773 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 50.5 | 4.8e-16 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l++ + ++G g+W+++++ g+ R++k+c++rw +yl
EMT09773 19 KGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYL 66
678*******************************************97 PP
|
2 | Myb_DNA-binding | 48.1 | 2.7e-15 | 72 | 116 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++
EMT09773 72 RGSFSQQEEDAIVGLHEILGNR-WSQIASHLP-GRTDNEIKNFWNSC 116
899*******************.*********.***********975 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MGRHAGTGGG GGVQQKLRKG LWSPEEDEKL YNHIIRYGVG CWSSVPKLAG LQRCGKSCRL 60 RWINYLRPDL KRGSFSQQEE DAIVGLHEIL GNRWSQIASH LPGRTDNEIK NFWNSCLKKK 120 LRQRGIDPST HKPISGVAGL EPDQASKDER PQAADGLALK QQQQQQQVFD PFPVADTFGA 180 GFDGAGMPLY DHLGGKDAAG FVDYSSVLDV SENLGYGESS SNSSNWNSAP EASNALEGEA 240 LHWASESKVE PFAGYAGDED DKFALPCHGQ QEHSMAHFDF NLEYF
|
Functional Description ? help
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Source |
Description |
UniProt | Possible transcription activator in response to an external signal. May be involved in the regulation of flavonoid biosynthesis. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK372534 | 0.0 | AK372534.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3004I06. |