 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT08336 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
MYB_related |
| Protein Properties |
Length: 307aa MW: 33053.6 Da PI: 6.712 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT08336 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 25.3 | 3.5e-08 | 15 | 63 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqky 47
+g+WT+eEd+ lv+ +++ Gg+ +W+ ++ g++R++k ++r +y
EMT08336 15 KGPWTEEEDKALVEHIQKRGGNggSWRGLPKAGGLNRCGKASRLRGTNY 63
79**************************999999*****9988886666 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MGRSPCCCHD AGVKKGPWTE EEDKALVEHI QKRGGNGGSW RGLPKAGGLN RCGKASRLRG 60
TNYLRPDIKR GNFSDGEERL IITLHAGLGN KYVGDDRDAP EGPDGQRDQE LLEHAHPQEA 120
VAHGRRPRHP PAAATRPDQP RRQRRRRRAP LGGGAASLGG LDTGALMQAQ LLQQLLQAIG 180
SNNSTTGLIA NLASANTVLN SSSSFVPNQM NYLQTGYLSN NSNFAEQHVV QQQLTNDTSP 240
GTSSFAAAEP ADQLCNTAAS YDVAPAGDWS PTQEFGGLLE PMMELPGLCS LEGDSFWKDT 300
SEDSYRL
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 140 | 145 | RRQRRR |
| 2 | 140 | 147 | RRQRRRRR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK243271 | 1e-116 | AK243271.1 Oryza sativa Japonica Group cDNA, clone: J100049K04, full insert sequence. |
