 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT08335 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
MYB |
| Protein Properties |
Length: 287aa MW: 31380.3 Da PI: 6.5001 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT08335 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 43.6 | 6.8e-14 | 15 | 60 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrw 44
+g+WT+eEd+ lv+++++ Gg+ +W+ ++ g++R++k+c++rw
EMT08335 15 KGPWTEEEDKTLVEYIQKRGGNvgSWRGLPKAAGLNRCGKSCRLRW 60
79******************************************** PP
|
| 2 | Myb_DNA-binding | 27.5 | 7.3e-09 | 59 | 82 | 23 | 47 |
-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
+W+tIa ++ gRt++++k++w+++
EMT08335 59 RWSTIATHLE-GRTDNEIKNYWNTH 82
4*********.************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MGRSPCCCQN SGVKKGPWTE EEDKTLVEYI QKRGGNVGSW RGLPKAAGLN RCGKSCRLRW 60
STIATHLEGR TDNEIKNYWN THIRKKLLRM GVDPVTHKQL PPDQSRHHLN ATSIAHHPEA 120
LLWAAAAASL GSMDTGALML AQLVQQFLQI IGSNNGTSGL IANLAAANAM LNSRGSMVPN 180
LQLQDQMNYL QLGYLCNTSN FTDQHVVQQQ LTNDTSPGTS SFAAGQEADQ LCNTAATFAS 240
HDVAPAGDWS PAKEFAGLME PTMELPDLCS LESDSFWKDI LEDSYHL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AF515725 | 5e-57 | AF515725.1 Lolium perenne R2R3 MYB protein MYB3 (MYB3) gene, partial cds. |
