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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT06644 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
MYB |
Protein Properties |
Length: 399aa MW: 43404 Da PI: 6.0572 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT06644 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.9 | 2e-17 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT++Ed+llv+ v+++G g+W+++ r+ g+ R++k+c++rw ++l
EMT06644 29 KGPWTPDEDQLLVEHVRRHGEGSWNAVRRETGLLRCGKSCRLRWANHL 76
79******************************99**********9986 PP
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2 | Myb_DNA-binding | 51.6 | 2.2e-16 | 82 | 125 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++++eE+ l+++++++ G++ W++I+++++ gRt++++k++w++
EMT06644 82 RGPFSPEEERLILRLHALIGNK-WARISAHLP-GRTDNEIKNYWNT 125
89********************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MAVEAPQPEQ AAGESLEQGA AAGGGRLKKG PWTPDEDQLL VEHVRRHGEG SWNAVRRETG 60 LLRCGKSCRL RWANHLRPNL KRGPFSPEEE RLILRLHALI GNKWARISAH LPGRTDNEIK 120 NYWNTRLKRR KRAGMALYPP DVEREVALVR AGKLRPIVDA DGNASSLQAP LLLDAAADQF 180 AWPAAPPFHP AYNNVAPPQP FQFTGNISHN PQALLAAQVP YLHHDEVSAG LGHANKLYAD 240 APGMPPLVPP AVQELPSNQS PADAGGPLEM LVLEQDQRLP GAALLRVTSM PELVYNENDY 300 SAWPSGLSGG SGSRSEGDVT SHYGGKCDCF DGVKPAKRMA ASLVVAEEEV SGLFGGEDLV 360 EVWPDKPPES ITKDDFNLQM EMQHLMPPVP LSADEHGLN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK373108 | 0.0 | AK373108.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3021G02. |