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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
EMT03563 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
NAC |
| Protein Properties |
Length: 387aa MW: 43484.9 Da PI: 6.6254 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT03563 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 164.3 | 4.5e-51 | 13 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99
l+pGfrFhPtdeelv++yLkkk+++k++++ e i+++diyk++PwdLpk + +++e+e yf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s+ +++
EMT03563 13 LMPGFRFHPTDEELVSFYLKKKIQQKPISI-ELIRQLDIYKFDPWDLPKlASTGGETESYFYCPRDRKYRNSARPNRVTAAGFWKATGTDRPIYSSeGTRC 112
689***************************.89***************5255557789*************************************856667 PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
vglkk+Lvfykgra +g ktdW+mhe+rl
EMT03563 113 VGLKKSLVFYKGRAARGIKTDWMMHEFRL 141
***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MESRNDVKSD EILMPGFRFH PTDEELVSFY LKKKIQQKPI SIELIRQLDI YKFDPWDLPK 60
LASTGGETES YFYCPRDRKY RNSARPNRVT AAGFWKATGT DRPIYSSEGT RCVGLKKSLV 120
FYKGRAARGI KTDWMMHEFR LPSLADTSLP KSRPIDKNIP LNDSWTICRI FKKTSSMAAQ 180
RALSHTWGAP LPGETEQDLF SALQPVQALH FASESSSSSL QVAAALPSNQ FNGKYGFQGQ 240
HQQFQKPSNT QENGSSCKVI SFNCGPSLQV LKGPIILPFQ TQPPSQRPML HTSPPIFFDA 300
QFGQPEQITG VVVTGSSEDV NADMSCREQE SSTTKHDDTF SMKNELEAPG RLNFPFDLGA 360
DSSDDWECNI PWESFLSPTA PDEIIQY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-49 | 13 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-49 | 13 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-49 | 13 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-49 | 13 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 4e-49 | 13 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 4e-49 | 13 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 4e-49 | 13 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 4e-49 | 13 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 4e-49 | 13 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 4e-49 | 13 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 4e-49 | 13 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 4e-49 | 13 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 3e-49 | 13 | 176 | 17 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 3e-49 | 13 | 176 | 17 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |
