 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT03085 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
Family |
MYB |
Protein Properties |
Length: 235aa MW: 26943.9 Da PI: 9.5313 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT03085 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46 | 1.2e-14 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l++ + ++ g+W++++r g+++++k+c++rw +yl
EMT03085 16 KGLWSPEEDEKLYNHIIRHVVGCWSSVPRLAGLNLCGKSCRLRWINYL 63
678*******************************************97 PP
|
2 | Myb_DNA-binding | 45.5 | 1.8e-14 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg + ++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w
EMT03085 69 RGCFLQQEEDHIVALHHILGNR-WSQIASHLP-GRTDNEIKNFWKL 112
678889****************.*********.***********86 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MGRPSSGGAG QPKLRKGLWS PEEDEKLYNH IIRHVVGCWS SVPRLAGLNL CGKSCRLRWI 60 NYLRPDLKRG CFLQQEEDHI VALHHILGNR WSQIASHLPG RTDNEIKNFW KLHQKKKLRQ 120 QSIDPATHKP MGATATAALP DAEEEDLLRW KGGRGLRRRR VLRRGRQLRV GRPGEPGLRG 180 ELQMLDGEVG SVLDGEVLHW AKAELAFADM EYEFSLPCQE QSLLPNFEFN MEHYF
|
Functional Description ? help
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Source |
Description |
UniProt | Possible transcription activator in response to an external signal. May be involved in the regulation of flavonoid biosynthesis. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK364378 | 1e-170 | AK364378.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2024H18. |