PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT02183
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CPP
Protein Properties Length: 765aa    MW: 84469.4 Da    PI: 8.7802
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT02183genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR42.31.5e-13151188240
       TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
               ++k+C+Ck+skClkkYCeCfa+g +C++ C+C++C N+ 
  EMT02183 151 TRKQCKCKNSKCLKKYCECFASGGYCND-CNCKNCYNNV 188
               579*************************.********96 PP
2TCR48.12.4e-15236276141
       TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
               k++kgC+Ck+s+Clk+YCeCf ++  Cse+CkC dCkN e+
  EMT02183 236 KHMKGCHCKRSECLKRYCECFRSNILCSENCKCMDCKNYES 276
               589***********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011149.4E-13150190IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163434.232151276IPR005172CRC domain
PfamPF036381.0E-9153187IPR005172CRC domain
SMARTSM011145.6E-17236277IPR033467Tesmin/TSO1-like CXC domain
PfamPF036387.7E-12239274IPR005172CRC domain
CDDcd092722.42E-75604743No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 765 aa     Download sequence    Send to blast
MDNPLNLPPG SVRSNFGSAF YARKPGSAPT AASLSHALPL WPPVPWPTLM VGKHHMPFPT  60
QPAAKKLQVR RLSPVLSQDL PLLEALQVAE LPPPRVQLRP LQQAPPVLKQ SLPKTEVPVV  120
LPMRATSVDV RWNARYPWNE TSCESTDRTS TRKQCKCKNS KCLKKYCECF ASGGYCNDCN  180
CKNCYNNVGH EAARQDAIDA AMERNPMAFM PKIGNIPPHA AQNREFKVAE GPLVGKHMKG  240
CHCKRSECLK RYCECFRSNI LCSENCKCMD CKNYESNEDR KAIRRITRHQ QHLVYAHHMQ  300
NPAAMGITGP YAALSPAAEK LSNLAVASSG RDQLISNNDS SQVTSSLLTP VPREGTKSAV  360
KVEPHGVAYR PLLADVIQIE NVNELCKVLL LVSRQAAGAS IGVKENTNGR KLDRADSCLS  420
SINHETEAVE KQRDEQACST ENSLTAVPVS EVRSGTPRSD PSDTWKYGRR PVSPETQKLM  480
CNEQDRLFLT PSVAAVIPSA TKQRLPDTYK EQEKRILKTL HDYLGELVNC GRLHEEKISS  540
MSSKFFHERT SVGSSCGSSI SRVAEVARVG QTIRQALHSP ASVKSPGTLN HGLHLNNSSP  600
NSLTAYSDAD WAGCPDTRRS TSGFCVFLGN NLISWSSKRQ VRVSCSSAEA EYRAVAHAVA  660
DTIWIRQLLS ELHRPIEQAT IVYCDNISAV YMTSNPVQHR RTKHIEIDIH FVREKVALGQ  720
VRVLHVPSTA QFADIFTKAL PTKPFQDICF SLNVVEPAVD TAGGC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A3e-301452834130Protein lin-54 homolog
5fd3_B3e-301452834130Protein lin-54 homolog
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3721950.0AK372195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2147P02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198634.10.0protein tesmin/TSO1-like CXC 5 isoform X1
TrEMBLR7W0820.0R7W082_AEGTA; Uncharacterized protein
STRINGEMT021830.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138462025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.16e-70Tesmin/TSO1-like CXC domain-containing protein