 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
EMT01615 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
Family |
MYB_related |
Protein Properties |
Length: 297aa MW: 32545.8 Da PI: 7.2209 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT01615 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 41.8 | 2.4e-13 | 18 | 62 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+ l++ + ++lG+g+W+ I+r + Rt+ q+ s+ qky
EMT01615 18 PWTEEEHRLFLLGLQKLGKGDWRGISRSFVVSRTPTQVASHAQKY 62
8*******************************************9 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009733 | Biological Process | response to auxin |
GO:0009739 | Biological Process | response to gibberellin |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MHASCSTNGR AERKKGTPWT EEEHRLFLLG LQKLGKGDWR GISRSFVVSR TPTQVASHAQ 60 KYFIRQTNFS RRKRRSSLFD MVPEMGLSAF STYVKLCADT CAFLFNLKPM DESPDGAEEF 120 TLCTTQDETT SSNKLSLFHL GRQKEAECDK DLPTLQLRQH EESEYAGPSL EAPDLEMNNG 180 VSFKAASVST VPAFYPALLP VPLTLWPANV SNVEAANATH EVLKPTPVNL KEAIKADEVV 240 SMSKLSIGGG TSGSMEPSAL SLQLTGPTNT RQSAFHVSPP MTRTDLSQGN NSPIHAV
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |