PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT01449 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 592aa MW: 64757.8 Da PI: 7.7193 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.6 | 9.5e-32 | 375 | 430 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vkgsefprsYY+Ct+++Cpvk+kve++ d+++ ei+Y+geHnh+ EMT01449 375 DGYNWRKYGQKQVKGSEFPRSYYKCTHPTCPVKRKVETTV-DGQIAEIVYNGEHNHP 430 9***************************************.***************8 PP | |||||||
2 | WRKY | 84.6 | 9.3e-27 | 536 | 589 | 4 | 59 |
SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 4 gynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++WrKYGqK v+g+ fprsYYrC++a+C+++k vers+ d + +++tYeg+Hnh EMT01449 536 AFRWRKYGQKAVNGNSFPRSYYRCSTARCNARKFVERSS-D-NSLVTTYEGKHNHV 589 69*************************************.4.567799*******6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50600 | 9.783 | 1 | 173 | IPR003653 | Ulp1 protease family, C-terminal catalytic domain |
SuperFamily | SSF54001 | 1.47E-31 | 18 | 218 | No hit | No description |
Gene3D | G3DSA:3.30.310.130 | 1.6E-5 | 69 | 167 | No hit | No description |
Pfam | PF02902 | 9.9E-6 | 76 | 171 | IPR003653 | Ulp1 protease family, C-terminal catalytic domain |
PROSITE profile | PS50811 | 22.871 | 368 | 432 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.8E-27 | 368 | 432 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-24 | 369 | 432 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.2E-34 | 373 | 431 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.9E-24 | 375 | 430 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.4E-27 | 533 | 590 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.3E-23 | 534 | 589 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.768 | 534 | 588 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-20 | 535 | 588 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.9E-22 | 536 | 588 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006508 | Biological Process | proteolysis | ||||
GO:0010214 | Biological Process | seed coat development | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008234 | Molecular Function | cysteine-type peptidase activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 592 aa Download sequence Send to blast |
MRPAGAASAS TAGEDGNERV LSYGDVVLLR SDLSILRGDD DGDLLLLPPS IPYLLSNLPD 60 PDSVAAVAEP LRLASRSLVL LPVNDNPDAS VAEGGSHWTL LVLDATNGAS RPRFVHHDSL 120 GVLNSDAARQ LAAVLRPLLP GAANGAPLVE GPTPMQANGH DCGVYVIALA RAICNWWRDR 180 RGQQQEGGAD WFDTVRKEVD AESVKAMRAE LLHLIARLIQ DKEDEKKNKA VVVFPYRQEY 240 MFQIYDTLQS ETCRHKWKMQ SQEKITPVKP VASRPFSSFT SFSKLLKDFT ATGSAKITSP 300 GETVIVRRPK ATRFAPPPSD LSAGVAASML QDAGLDTTRE KMVIDPEQVV SCDQMTAFHD 360 INKPIHSVKN RLSYDGYNWR KYGQKQVKGS EFPRSYYKCT HPTCPVKRKV ETTVDGQIAE 420 IVYNGEHNHP QPHPPKKPVS SASTEVVVPD AHGNNDAGAE SQLGECNLAL VSDPVAAAFK 480 SSCDYVDEFG NTGPVYHCNT SPKEKQSSIA NGLPSSGEAA PAFQPPTECR SSGDAAFRWR 540 KYGQKAVNGN SFPRSYYRCS TARCNARKFV ERSSDNSLVT TYEGKHNHVQ LR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2bkq_A | 2e-18 | 20 | 180 | 5 | 182 | SENTRIN-SPECIFIC PROTEASE 8 |
2bkq_B | 2e-18 | 20 | 180 | 5 | 182 | SENTRIN-SPECIFIC PROTEASE 8 |
2bkq_C | 2e-18 | 20 | 180 | 5 | 182 | SENTRIN-SPECIFIC PROTEASE 8 |
2bkq_D | 2e-18 | 20 | 180 | 5 | 182 | SENTRIN-SPECIFIC PROTEASE 8 |
2bkr_A | 2e-18 | 20 | 180 | 5 | 182 | SENTRIN-SPECIFIC PROTEASE 8 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK368982 | 0.0 | AK368982.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2083E14. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020177870.1 | 0.0 | WRKY transcription factor 44-like | ||||
TrEMBL | N1QRF5 | 0.0 | N1QRF5_AEGTA; WRKY transcription factor 44 | ||||
STRING | EMT01449 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2325 | 29 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 1e-48 | WRKY DNA-binding protein 3 |