PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT01102 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 365aa MW: 40612.7 Da PI: 10.1965 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.3 | 3.8e-09 | 76 | 120 | 9 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 r + NR +A rs +RK +i+eLe+kv+ L++e ++L +l+ l+ EMT01102 76 RIMANRQSAARSKERKMRYIAELERKVQCLQTEATTLSAQLSLLQ 120 6789**********************************9998875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 8.887 | 70 | 120 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 7.9E-8 | 71 | 132 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.0E-11 | 76 | 121 | No hit | No description |
SuperFamily | SSF57959 | 6.19E-10 | 76 | 127 | No hit | No description |
CDD | cd14703 | 1.25E-18 | 76 | 121 | No hit | No description |
Pfam | PF00170 | 3.7E-8 | 76 | 120 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence Send to blast |
MSMDGSTSFG SASSGVSGRH GADAKKAISD AKLAELALVD PKRAKRDSRN IGYRIAAVDR 60 DRLDGFCLFE KESSPRIMAN RQSAARSKER KMRYIAELER KVQCLQTEAT TLSAQLSLLQ 120 AYQYIIHKVL SEAIAISTVL TMTKGKETAP AGEVAFHVRD QRSESREVEL GWAAGEAMKA 180 HPRLESTNRE RQDHLDVGHS QKVPNPLRDT SGLTNENGDL KLQVQTMEQQ VRLQDALNDR 240 LRVQQLKIAT GQLNANNGNL GNFGGLSSYG VNPQSYQRSQ MQQQSLLAAQ QLQQLQIHSQ 300 HQQPQMHMQQ QRLASVRQQQ QQQQQQSQLR PEALPFPGDL KMKGIAMTAH VQNAGPFDGR 360 ARSEP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK366888 | 1e-147 | AK366888.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2047M20. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020150534.1 | 7e-58 | transcription factor RF2a-like | ||||
TrEMBL | R7W240 | 0.0 | R7W240_AEGTA; Transcription factor RF2a | ||||
STRING | EMT01102 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 4e-20 | bZIP family protein |