PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Do029529.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family | bZIP | ||||||||
Protein Properties | Length: 153aa MW: 16892.1 Da PI: 7.0426 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.3 | 5.3e-16 | 88 | 140 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++r +r+++NRe+A rsR+RK+a++e+Le++v L eN +Lkk+ +e k+ Do029529.1 88 DDRRSIRMMRNRESALRSRARKRAYVENLEKEVRRLVDENLKLKKQCKEVLKH 140 5799************************************7777776665554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.0E-11 | 86 | 151 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-14 | 87 | 140 | No hit | No description |
PROSITE profile | PS50217 | 10.542 | 88 | 133 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.6E-14 | 89 | 142 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.71E-18 | 90 | 136 | No hit | No description |
SuperFamily | SSF57959 | 8.13E-12 | 90 | 139 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MAANYHHYQM AVHAAAAAAA AWREPDSPQL SFVSGCSSLF SISTLQDDDD GAVVIAGHAM 60 PSTPVSLAGF AGDEVDMEVQ QISGGSGDDR RSIRMMRNRE SALRSRARKR AYVENLEKEV 120 RRLVDENLKL KKQCKEVLKH SEPCMSSALF IYF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Do029529.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT033858 | 1e-120 | BT033858.1 Zea mays full-length cDNA clone ZM_BFc0165B20 mRNA, complete cds. | |||
GenBank | JX469961 | 1e-120 | JX469961.1 Zea mays subsp. mays clone UT3223 bZIP-type transcription factor mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025812603.1 | 5e-91 | bZIP transcription factor 46-like | ||||
TrEMBL | A0A1E5WIY2 | 1e-110 | A0A1E5WIY2_9POAL; Uncharacterized protein | ||||
STRING | Si007412m | 5e-86 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-11 | bZIP family protein |