PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_022792
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 572aa    MW: 62182 Da    PI: 8.2563
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_022792genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.2e-10419477563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr +r   NR +A rs +RK+ +i eLe kv++L++e +aL  +l  l+  +a l++++
  DCAR_022792 419 KRVKRILANRQSAARSKERKLRYISELEHKVQTLQNEATALSAQLTLLQRDSAGLTNQN 477
                  899***********************************************999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-18415479IPR004827Basic-leucine zipper domain
PfamPF077162.5E-9416468IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.772417480IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-11419476No hitNo description
SuperFamilySSF579595.27E-11419475No hitNo description
CDDcd147032.30E-24420471No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MGENEKGNVD MMHRGQSSVG ALLKQNLSNQ LDMSQFNTAQ LRTQMRQFSP SYVESSKRIG  60
IPPSHPQMPP VSPYSLSPGS RPGALQAGLQ NHGTGPSHAR SLSQPSFFSL DSLPPLSPIP  120
YKDSSPTNNC DGLNVDLPLM EDKGVNANSL LPPSPFTRGN TLRVGDSLPP RKAHRRSSSD  180
IPFGFSTIMQ SSPPLIPLQG HGGLERSASP RDNLGLKPAV LVKQESSWDK GSEGKTEATG  240
DGKSEGEVVD DLFSAYMNLD KLEALNSSGT SNNKVFENHE DLDSKASGTK TNGDCSDNEG  300
SSSSISKSGT SIQRAGISSS GERREGVKRN AVGDIAPTAR HYRSISMDSF MGKMNFGDES  360
PKMPPSPGTG PGQLSPSNSV DENLNTFSLE YRNAEFSGDE LKKIMANEKL VEIASSDPKR  420
VKRILANRQS AARSKERKLR YISELEHKVQ TLQNEATALS AQLTLLQRDS AGLTNQNNEL  480
KFRLHSMEQQ AQLRDALNEA LTSEVQRLKI TAADLNGQSA KFQQLSLNSQ MFQFHQQQPN  540
QLSGHQLQQQ QLNQTSQLQQ IESTNTKHAS T*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017254268.10.0PREDICTED: transcription factor RF2a
TrEMBLA0A164V5N60.0A0A164V5N6_DAUCS; Uncharacterized protein
STRINGVIT_03s0038g00860.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-125bZIP family protein