PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_018136
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family Trihelix
Protein Properties Length: 1010aa    MW: 112268 Da    PI: 7.0435
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_018136genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.25.1e-092513002372
     trihelix  23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                  ++k ++ + ++vs++++++g++r +kq   kw+n+ ++y+++ ++e+ + 
  DCAR_018136 251 ATKTRAEKDKQVSEYLKSHGVNRDAKQAGTKWDNMLGDYRRVYKWERFGG 300
                  4567888999************************************9773 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500118.542713996IPR000719Protein kinase domain
CDDcd001805.82E-13863995No hitNo description
SuperFamilySSF561122.38E-15863994IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.102.1E-5868958No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1010 aa     Download sequence    Send to blast
MGDTKGGDNT KKQHLTTTTT SSSPPTHPQQ ASAAAAQDSS TDSIPHHHHL VGVSGSPFLS  60
PPPPLYTNIP AHGSATVPSS FDQNQIVVNT NPKRPRYTSA GQWKLLPSPS PSQKQTNLPY  120
QQVNIPLVIS NESTPSPSNQ PPSTIPPPPP PPAAAAASSS DTAASSPSHP SLSGSQECAN  180
LSEAGGDEQL LQQQEQRLQM RKGKIVSPPW KPNESLWLAR AWRIQYEGGS TSAPPQEGQG  240
GSGQPATGRS ATKTRAEKDK QVSEYLKSHG VNRDAKQAGT KWDNMLGDYR RVYKWERFGG  300
RDQTGRSFFR LSSVERKTYN LPTSFDEQVY DELCQFMGSR MRTLISNSRP GAFDDPCPSH  360
LLLRSLPPPP IFRDDNDIPL TARAKQLGLT SGGEAFGQGG RGSLLGYDTG CSSDVMLTPS  420
RELKRIGKVR MIWEESVNLW GEEGEHHRGR VKVQGLSFLN ADELTYLDDS MVACTLETFE  480
DATPLKGFSV DRFLSGQQIK VFGRRNSSTS APPNPASFSG FHDRMQLPST EPSIRSITAW  540
EFQDPTEYYL GCLKIPPSTL PSLVELSWYL QEPPAEELRF PLRKDVYRDL PQGKELFFTT  600
SSELLDCRAI MYEILSPIIR SNPSLTASTR DSFIGLWDDC INRLISKFCS SEMVFIRKPS  660
SHSAEDPFQD QWPNLTAFMR NFCLWRGEET DQVREGQVDP SNSIVEKLSW TYTDLPYVLG  720
YYAVGYIVTF CAFSPSQDGN IIRTDIHTLD LSTPAERLKA LIPCWRIAGL LSLLAERCLF  780
HINKGGKNPK LSPYSDFERI ELGSGNVVEM TPNTVTKYFS NKRKWCAVKE IYDFLDQRIP  840
HSEIIFRDSE KDLALTFKPR GCKFKPKNLD QLVDALKCVT EALVALHDLS FMHRDLDWDK  900
VVMRRSSENI EWFLTGFEEA VGAPQIYPHA AASGKHAPEM GRGMHGVKVD VWGVGMLVKS  960
SGVASIPKLL RELQNRCLDP NPEQRPTAAD CYHHLLQLHS SMPPSTTFD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017252067.10.0PREDICTED: uncharacterized protein LOC108222696
TrEMBLA0A164YRS20.0A0A164YRS2_DAUCS; Uncharacterized protein
STRINGVIT_16s0022g02290.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA129361416
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.12e-08sequence-specific DNA binding transcription factors