PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_008328
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family Trihelix
Protein Properties Length: 420aa    MW: 47206.8 Da    PI: 9.3922
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_008328genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix60.83.4e-1919109187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  +Wt++e laLiea+re++ +lrrg l+ ++W++v++++          +++ qC++k+e+l++ry+++k+++ +   +  s++ yfd+++a
  DCAR_008328  19 CWTQEEALALIEAYRERWYALRRGYLRTADWDSVADAVgqrcPGASPAKTSAQCRHKMEKLRQRYRAEKQRSHSYPGRFFSSWFYFDSMDA 109
                  8*************************************87443344478999**********************9999999********85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.8E-1918110No hitNo description
PROSITE profilePS500906.8412080IPR017877Myb-like domain
SMARTSM005955.1E-1427115IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MTTIEAAPAK IPRKFPPPCW TQEEALALIE AYRERWYALR RGYLRTADWD SVADAVGQRC  60
PGASPAKTSA QCRHKMEKLR QRYRAEKQRS HSYPGRFFSS WFYFDSMDAM ENGTSPGDGS  120
NQVTVVEHNS VPLGFNLKNT SKKIANDFPS PNVDHEGVLF RGGFRVKGVN DRNTVPLGFR  180
LKNSDKIDAK LNPNVGYRVP SGYPFYLNGG SDEENENNGS QFEGGSSDYR AEKFGNGGIR  240
IKTPSDQMMP PSFRARKVGK FEGKVDREYE CDDGGGYDGV GEDGDGEYWV KVPHDRNSAP  300
VGTRQKFSNK NDRNSSPSVD PRFMNGFPSQ ARSDYDRKSG SNGVKRGRNP IEDMVSSIKS  360
LGEGFVKMEK MKMEMAKEIE KTRMDMEMKR NELWIESQQQ IVDALVKGLF EKKVKSPDS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017236285.10.0PREDICTED: uncharacterized protein LOC108209730
TrEMBLA0A166F9110.0A0A166F911_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127741617
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-38Trihelix family protein