 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cucsa.366510.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
B3 |
| Protein Properties |
Length: 305aa MW: 35088.2 Da PI: 9.8988 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.366510.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 54.6 | 2e-17 | 26 | 121 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95
fkv d+lk++ l +p+kf++e+g+k + ++ l+ ++g++W+v l+ ++++ r++l GW++ v +k+g f+vFk+++ +f +v
Cucsa.366510.1 26 FKVV-LDDALKEQKLEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSGYFLVFKYENPsPSF--YVV 117
4544.478999999**************99999****************9999******************************9865555..999 PP
EE-S CS
B3 96 vfrk 99
+f++
Cucsa.366510.1 118 IFDH 121
9987 PP
|
| 2 | B3 | 56.6 | 4.6e-18 | 205 | 297 | 4 | 95 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
+ ps+ ++++ l++pk+fa+ + ++ + ++++l+ ++gr W+ ++ + + k +r ++ + GWk+F ++n+L +gDf+vF+++g+++++ +k
Cucsa.366510.1 205 KIWPSHIHRTKSLSIPKNFADMNLED--SITKIILKASDGRMWSGECGFywTPKMQRmTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFK 297
5668999999**********988433..3358************9995445555555577789********************998877766665 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MASSSHYRSN SIVKQSSGAL HNPHFFKVVL DDALKEQKLE IPRKFVREYG LKALLKDQIC 60
LKVRDGKEWN VGLTKSNNGT RVWLHYGWEK LVGFYSVKSG YFLVFKYENP SPSFYVVIFD 120
HTATEIEYPV KKTRLDKAKE KVKMETYFDD DCLDLDFKDG DLSSGVKKPT NSRWRPPSTG 180
SQQARAMAEA NRFQSMTLNP SFICKIWPSH IHRTKSLSIP KNFADMNLED SITKIILKAS 240
DGRMWSGECG FYWTPKMQRM TFYKYGWKSF IRDNNLAVGD FCVFEMTGKN STTVAFKVES 300
FRAS*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | LN681913 | 1e-147 | LN681913.1 Cucumis melo genomic scaffold, anchoredscaffold00045. |
| GenBank | LN713265 | 1e-147 | LN713265.1 Cucumis melo genomic chromosome, chr_11. |
