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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cucsa.356720.1 |
| Common Name | Csa_1G657480, LOC101206605 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
WRKY |
| Protein Properties |
Length: 528aa MW: 58329.7 Da PI: 6.4544 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.356720.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 105.2 | 3.5e-33 | 80 | 136 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK+vkgse+prsYY+Ct+++C vkkkvers d++++ei+Y+g Hnh
Cucsa.356720.1 80 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCLVKKKVERSL-DGQITEIIYKGAHNHA 136
7****************************************.***************7 PP
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| 2 | WRKY | 104.2 | 7.2e-33 | 268 | 325 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+vkg+++prsYY+CtsagC v+k+ver+++d k+v++tYeg+Hnhe
Cucsa.356720.1 268 EDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCLVRKHVERASHDLKCVITTYEGKHNHE 325
8********************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 528 aa
Download sequence Send
to blast |
MVCQDLYDKR IPKCRVIFYF DGKIVNGNCE NMESCLSSIT TNQPCIHEES TQGDDIDTQH 60
PLEDEQKGSY IPMGMLRTSE DGYNWRKYGQ KQVKGSEYPR SYYKCTHPNC LVKKKVERSL 120
DGQITEIIYK GAHNHAKPDP NRRAMAGSVP ISGDNPEIGE GGGNHSKLEA GLTWRNSQYG 180
KTVGVLEPVG TPELSSTLAS HDDDNGGGGD DDLTTQGSIS VCTEADDAEP ELKRRRKEDS 240
SIETNLASRS VREPRVVVQI ETEVDILEDG YRWRKYGQKV VKGNPNPRSY YKCTSAGCLV 300
RKHVERASHD LKCVITTYEG KHNHEVPAAR NSSQVNSGNG NAQPPASHVQ PNMGLSRNSN 360
VPKSETEIQD LATHFYPKPE FNNDYQRSGF DTFTNDMKLG APPFCQMKFP PLRNTLPYST 420
FGLSSKHTAT GISGSLASVV SDFPISLPLN QKLSAAGYDY TNGRPILPFQ VFLAGQQLRE 480
TDRFLTPKQE HDDDNICASF QPVVDSSSGS SSSSISSVYQ QIMGNFT*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}. |
