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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.352410.3 |
Common Name | Csa_4G641520 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 343aa MW: 36939.5 Da PI: 10.5686 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.352410.3 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 32.2 | 2.2e-10 | 321 | 340 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS
WRKY 3 DgynWrKYGqKevkgsefpr 22
D y+WrKYGqK++kgs++pr
Cucsa.352410.3 321 DDYSWRKYGQKPIKGSPHPR 340
99*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MLLLNNNMAV ELLVGFGDAT TSNHFTPNME ENAAVSAVQE AASAGIQSVQ NFLRLMSHTT 60 NHQHSQHDSS TSSTPNNGYQ AVADSVVNKF KKVISLLDRN RTGHARFRRA PVLTTTTTTT 120 TTPPPPPPPK VKPQHQDPSS SSPISVPPVQ VKKQESVSAF KVYCPTPSSV VRLPPLPHNN 180 PHQPSHPSNT FQAQQNTSSV VLKNGSVDRK DATTTINFAA SPPISAANSY ISSLTGDTES 240 LQPSLSSGFQ FTHMSQVSSA GKPPLSSSSL KRKCNSMEDS AMKCGSSSGR CHCSKKSRKN 300 RIKRVIRVPA VSSKLADIPP DDYSWRKYGQ KPIKGSPHPR LE*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984027 | 0.0 | GU984027.1 Cucumis sativus WRKY protein (WRKY33) mRNA, complete cds. |