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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.250310.1 |
Common Name | Csa_2G297220 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 247aa MW: 28422.8 Da PI: 9.8469 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.250310.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 100.7 | 8.5e-32 | 169 | 227 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
Cucsa.250310.1 169 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHS 227
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MGSKSQVMLN PQALLEDHQE VTPNSQMGFF NFPSNLTFFQ LPSIPQTHSP SPSFDPPNFS 60 TSNNNTNNNN NSNNLSETLL SSSILPLKSS ISYELAPQHL LSLQTSTPNL WPWGEIGERL 120 LMNGKRSNNN ENYNNQLGVS KMKMKKMKGR RKVREPRFSF KTMSDVDVLD DGYKWRKYGQ 180 KVVKNTQHPR SYYRCTQDHC RVKKRVERLA EDPRMVITTY EGRHVHSPSH DSEDSEAQTH 240 LNNFFW*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984038 | 0.0 | GU984038.1 Cucumis sativus WRKY protein (WRKY53) mRNA, complete cds. |