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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.195730.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 406aa MW: 44628.9 Da PI: 8.4737 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.195730.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 91.4 | 7e-29 | 182 | 240 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ ++itY +Hnh+
Cucsa.195730.1 182 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLVITYAFDHNHQ 240
69*************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MTTLCIKPHL ILSLLIPFFT ISPPPISLFL FSFSLISALR FIQQFPSPPI YLLISSILSL 60 FLPWTAVFVQ THSSPNRKIP KPPPTTAYPN HPPTAMTQNP PPLLHLLRRG LFQIQFNFIS 120 LSFFLFIRNT HTHTYFNLTV FVFVWGFFLD TYSRRGVQKR VVSVPITDVE GSKSKGEAYP 180 PSDSWAWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSRVDPTKLV ITYAFDHNHQ 240 LPVTKSHHHH HHNSSPSSAV IAAVSAATDF PSPGSTTTSS STSSGDNTNA APSSPAAKFE 300 EAAAVFASQP ELELGGDSLM IKPCIGDFGW LGEVAYDRIL EGPICGGGDI FDDADVMVLS 360 TRGDDEEESL FADLGELPEG SVVFGRRRTV QPNGPNRTCG TVLNC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984033 | 0.0 | GU984033.1 Cucumis sativus WRKY protein (WRKY47) mRNA, complete cds. |