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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.194390.1 |
Common Name | Csa_2G162660, LOC101221096 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
GATA |
Protein Properties |
Length: 288aa MW: 31023.7 Da PI: 7.0242 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.194390.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 56.2 | 4.7e-18 | 210 | 244 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
Cucsa.194390.1 210 CLHCGAEKTPQWRAGPFGPKTLCNACGVRFKSGRL 244
99*****************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0007623 | Biological Process | circadian rhythm |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MESSLAFMDD LLDFSSDIGE EDEEDDAVPP FSVKPKSSST TAPDSSDLNA AAMHPDDSSS 60 CRVLPEEYAE EELEWLSNED AFPAVETFVD ILSDHHHHHA PQPPPLPSVS KQNSPVSVLE 120 STSISSHGET TNGGNKTSVH SSSILMSCCG SLKVPSKARS KRRRGRHISG HHLLFKQQPS 180 SKNLKQVVPT TATAAVVAAT TGTAGIGRKC LHCGAEKTPQ WRAGPFGPKT LCNACGVRFK 240 SGRLVPEYRP ASSPTFSAEL HSNSHRKVME MRRQKQLGMV VNPMDKG*
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