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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.177060.1 |
Common Name | Csa_3G727990 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 281aa MW: 31573.8 Da PI: 5.3836 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.177060.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 77.2 | 1.9e-24 | 122 | 183 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+dDg++WrKYGqK++ ++++pr+YYrCt++ +C+++k+v+r +++p + +tY g+H+++
Cucsa.177060.1 122 VDDGHAWRKYGQKTILNAKYPRNYYRCTHKydqTCQATKQVQRLQDNPPKFRTTYYGNHTCS 183
59***************************99999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway |
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
GO:0010200 | Biological Process | response to chitin |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:1900056 | Biological Process | negative regulation of leaf senescence |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MDCSWPDTTP FDRRKAADEL LRGRELAQQL RAYLQISSTP ASQDLLTRIL SSFSKTLSIL 60 NHRCDSDDIN GSIVDSPEDH GSRKSEESGD SCKSSTPNND RRGCYKRRKS CQSWARESCD 120 LVDDGHAWRK YGQKTILNAK YPRNYYRCTH KYDQTCQATK QVQRLQDNPP KFRTTYYGNH 180 TCSNFLKASD IVLGSSNFDD SCSGVLLSFD TTAAPNFFLP HDPTLVKKEE VVTPDAGSGR 240 DDEAVCSPSD YMSTADDHLS EVFMGSVVDF EDDDLPPFHF *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984021 | 0.0 | GU984021.1 Cucumis sativus WRKY protein (WRKY22) mRNA, complete cds. |