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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.168370.1 |
Common Name | Csa_2G224260, WRKY10, WRKY9 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 185aa MW: 20490.3 Da PI: 10.3844 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.168370.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.6 | 2.3e-32 | 117 | 176 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60
+D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp+++++tYegeHnh+k
Cucsa.168370.1 117 SDDYSWRKYGQKPIKGSPHPRGYYKCSSIrGCPARKHVERCLEDPSMLIVTYEGEHNHPK 176
69************************9988****************************85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 185 aa
Download sequence Send
to blast |
MKHQAEMMFL RNNNGMNLNF DTSNCTLTMS SARSFISSLS MDGSVIGDRS SFHLIGPSTT 60 TTTTSGNSKR KFSARGEEGS LKCGSTSKCH CSKKRKHRVK RSIKVPAISN KLADIPSDDY 120 SWRKYGQKPI KGSPHPRGYY KCSSIRGCPA RKHVERCLED PSMLIVTYEG EHNHPKMSTQ 180 SAHT*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984012 | 0.0 | GU984012.1 Cucumis sativus WRKY protein (WRKY9) mRNA, complete cds. |
GenBank | GU984013 | 0.0 | GU984013.1 Cucumis sativus WRKY protein (WRKY10) mRNA, complete cds. |