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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.165340.1 |
Common Name | Csa_5G182030, LOC101220381 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
Dof |
Protein Properties |
Length: 322aa MW: 34060 Da PI: 9.2394 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.165340.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 123.8 | 5.5e-39 | 73 | 133 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e+ lkcprC+stntkfCy+nny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++
Cucsa.165340.1 73 PEAGLKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 133
67889*****************************************************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MVFPPLPSYL DPPNWQPLTN HQTGGNDTAE DSGQVLLPPP PGGGGGGDGG GGTGSIRPVS 60 MTDRARLAKI PQPEAGLKCP RCESTNTKFC YFNNYNLSQP RHFCKTCRRY WTRGGALRNV 120 PVGGGCRRNK RTKSRNRSKS PAASERQLLG GSTNSTAAVS LSTQPHLPFL SSLHNFSTYG 180 LNLGIIPPQA PPTSGGSAAG GVDVHEFQGD HWRLQPPQQF PLLANDQQPN LLYTFEPPEG 240 AMARYNLGGF SRLGIENDIG MTMESGAVKV EESKGMNLGK NFQFWVGGGG GNDVNAWSGG 300 GSGGADLHGF SSASASHLLR Q*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements. {ECO:0000269|PubMed:12887587}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By auxin and salicylic acid (SA). Repressed by jasmonic acid (JA). {ECO:0000269|PubMed:10758484, ECO:0000269|PubMed:12887587}. |