 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cucsa.133460.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
GeBP |
| Protein Properties |
Length: 354aa MW: 40226.6 Da PI: 4.9322 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.133460.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 90.3 | 2.3e-28 | 119 | 215 | 5 | 97 |
DUF573 5 rlwseeDeivlLqGlidfkaktgksps....ddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95
+w++eDei lL+G+++++ k+ s++ +d afy+++k +i++ k+ql++K+rrLK+K+++ +k++ gk+p+f+++h+q +f++s+ki
Cucsa.133460.1 119 TIWTNEDEIKLLRGFLEYALKNRISSHrlqqQDAVAFYRKIKPKIQLCCDKNQLIDKLRRLKRKYQNTLRKINCGKKPAFKSQHEQLTFDISRKI 213
69****************999998554222269************************************************************** PP
DUF573 96 Wg 97
Wg
Cucsa.133460.1 214 WG 215
*8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MTWPLSGWIF SSSSSSSMEE EEEEDEDQNT QLTDSDEHET HLNNDDDDEY QGDSYQEDAQ 60
NNEQNAAVSD ETDAADLHQS KTNSFCPIED HIPTAIAIPA NATTNNIVTV AIPARRRTTI 120
WTNEDEIKLL RGFLEYALKN RISSHRLQQQ DAVAFYRKIK PKIQLCCDKN QLIDKLRRLK 180
RKYQNTLRKI NCGKKPAFKS QHEQLTFDIS RKIWGRNSGR KQTSAKDSIL DEVLADINPN 240
FTETKVKTEN LGDEYEERDD IQLTKRRRTA FLSGEASNSN EIPMRPSSVL DDIGKFSGLV 300
EEVAKGCLTP FFKELISNGW PPVGLARRIP GHCNITLISL YFGSYFFAFS TES*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT3G04930.2 | 2e-29 | DNA-binding storekeeper protein-related transcriptional regulator |
