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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.107350.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
ERF |
Protein Properties |
Length: 278aa MW: 30015.8 Da PI: 8.4081 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.107350.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.5 | 6.1e-17 | 91 | 135 | 2 | 50 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50
y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+
Cucsa.107350.1 91 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAA 135
59******9.**********954...5********************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
FTDIRTLLSN LLLSPHSTNT LDSIFSHCLP SSAAPPTESP LGSSVYLRQR DLVHQFCLEN 60 RDACSSANLH LHPLGISTGY GGFPTAVKKK LYRGVRQRHW GKWVAEIRLP QNRMRVWLGT 120 YDTAEAAAYA YDRAATLEIW DFADCGRLNA LKNSVDAKIQ AICLKMKKEK AKKNSKKSDP 180 KNGAVSESCS MSSSSPAVEE WCRSGEMGCS SVVSEDGFWR SENSPPASSS SSGSAESSAA 240 VAAEAVVGEG VCEGYSSLAK MPSFRSRFDL GSSCKLN*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 5e-14 | 90 | 135 | 1 | 47 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 5e-14 | 88 | 135 | 2 | 50 | ATERF1 |
3gcc_A | 5e-14 | 88 | 135 | 2 | 50 | ATERF1 |