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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.102040.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
B3 |
Protein Properties |
Length: 310aa MW: 35015.1 Da PI: 9.8226 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.102040.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 58.3 | 1.4e-18 | 21 | 111 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
ffkv++p+ ++s+ +++p f++ ++g + + +++d+s +sW v+l + ++ +++++GW+eFv++++Lk g f+vF++dg++ f vk
Cucsa.102040.2 21 FFKVFLPN--SSSQSMSIPPAFVKYFNGR--IPSEAIIRDQSRNSWHVTL--EELKNIVLFKDGWQEFVDSHHLKRGYFLVFQYDGSHVF--DVK 107
89999555..555559*******655655..56689**************..9**99****************************98888..999 PP
EE-S CS
B3 96 vfrk 99
+f k
Cucsa.102040.2 108 IFGK 111
9876 PP
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2 | B3 | 36 | 1.3e-11 | 227 | 292 | 35 | 98 |
EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE..E-SS.SEE..EEEEE- CS
B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk..ldgr.sefelvvkvfr 98
l++ de grsW vk + ++gr+ lt+GW F an L D ++F+ ld++ ++el+vk+ r
Cucsa.102040.2 227 NLVIIDEMGRSWVVKAR-PISRGRFSLTSGWGAFFIANSLTIDDECTFEfvLDSNnLCGELKVKITR 292
68999***********2.445556*************************776777789999999876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MAKSVMAVVD PGSRIPSTLE FFKVFLPNSS SQSMSIPPAF VKYFNGRIPS EAIIRDQSRN 60 SWHVTLEELK NIVLFKDGWQ EFVDSHHLKR GYFLVFQYDG SHVFDVKIFG KNGCKKELVS 120 RISNPVPTVK VKDEPLSEED YSTSLTRCKR SDSEVRSTDS SGTAPKSRRR STSNLEEHSP 180 SKTAKHISMK LPSPTPTFKH IVKHWSYKAI QIPQLIMVSN DILLKPNLVI IDEMGRSWVV 240 KARPISRGRF SLTSGWGAFF IANSLTIDDE CTFEFVLDSN NLCGELKVKI TRSLEITQQE 300 KQKTIVQEG*
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