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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.101460.1 |
Common Name | Csa_6G486880 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 245aa MW: 27872.5 Da PI: 9.41 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.101460.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.2 | 2.9e-32 | 162 | 220 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vk++ +prsYYrCt ++C+vkk+ver a+dp++v++tYeg+H h+
Cucsa.101460.1 162 LDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLADDPRMVITTYEGRHAHS 220
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:1901141 | Biological Process | regulation of lignin biosynthetic process |
GO:1904369 | Biological Process | positive regulation of sclerenchyma cell differentiation |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MGSSASEEEM MVRLLKGGDQ VAAAVNAAAI TTNLICLPEN NNKNNIISVV QQSLKPLFFT 60 TTHHHHQQQE QQSLFPFCFP STTTTSHLLP SSPSSLWDER GVSFMRGRNA IGNYGGEDDH 120 NNENDGKPRL RVSTMKMKRI KGRKKVREPR FSFKTMTDVD VLDDGYKWRK YGQKVVKNTL 180 HPRSYYRCTE ENCKVKKRVE RLADDPRMVI TTYEGRHAHS PSDHNLEDSF MGHLPSSHLT 240 NFFC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984031 | 0.0 | GU984031.1 Cucumis sativus WRKY protein (WRKY43) mRNA, complete cds. |