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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cucsa.096680.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
WRKY |
| Protein Properties |
Length: 273aa MW: 30975.4 Da PI: 4.632 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.096680.2 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 75.2 | 7.9e-24 | 54 | 107 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr C+++ gC++kk+ver+++d+++++itY+++Hnh+
Cucsa.096680.2 54 DFWSWRKYGQKPIKGSPYPR----CSTTkGCSAKKQVERCKTDGSMFIITYTSSHNHP 107
99***************996....88777****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MNIIFFQLNP HQKKNNPFPK KRKVVQKTVV TVKIGSKKAA IGIGKMKNEG PPPDFWSWRK 60
YGQKPIKGSP YPRCSTTKGC SAKKQVERCK TDGSMFIITY TSSHNHPGPN ISTLNLDQNY 120
QQEIDPPQPL DRDDDEDHHD LVPNQAQDHD NNSNNDDKNS IIISQSTEEE EVEEVEEEEE 180
DELLLVEDEE KKGIEKIKDE CLDQEPIIIS SSSNSSSCCD ELMIIKTKKS EIENHDHFFD 240
ELEELPIPPP FSSTLMRSSY SFDEIRISAA PS*
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