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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.042350.4 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 349aa MW: 38185.1 Da PI: 7.0839 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.042350.4 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101 | 7.3e-32 | 210 | 267 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++++i+Y+g+H+h+k
Cucsa.042350.4 210 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITDIIYKGTHDHPK 267
8****************************************.***************85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009611 | Biological Process | response to wounding |
GO:0009961 | Biological Process | response to 1-aminocyclopropane-1-carboxylic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MDPTDSDLPD PSNASSGAKY KLLSPAKLPI SRSPCITIPP GLSPTSFLDS PVLLTNLKVE 60 PSPTTGSFTK LPMAHDSSGS AIYPMTSMAF SNTNASDEGR SNYFEFKPYV GPNMVPADLS 120 HRKGEQFSEV QGQPQPFTAP PMTKMEISVM SNDLSRSTQM DTHTVASGVS VPEANGDEIN 180 HSLNTNSRVQ APQSDPKGSG IPVVSDRLSD DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC 240 EVKKLFERSH DGQITDIIYK GTHDHPKPQP SRRYSASASM NVQEDGTDKP SSLPGQDGLA 300 ACMLRQCIPL SQMELQIHPC LQMIGSLKVQ EQLCHARITM RLMMMTYT*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984017 | 0.0 | GU984017.1 Cucumis sativus WRKY protein (WRKY17) mRNA, complete cds. |