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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.042340.3 |
Common Name | Csa_3G061560 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 462aa MW: 51182.6 Da PI: 6.6562 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.042340.3 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 100.4 | 1.1e-31 | 138 | 195 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++++i+Y+g+H+h+k
Cucsa.042340.3 138 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITDIIYKGTHDHPK 195
8****************************************.***************85 PP
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2 | WRKY | 105.6 | 2.5e-33 | 313 | 371 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+
Cucsa.042340.3 313 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 371
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009611 | Biological Process | response to wounding |
GO:0009961 | Biological Process | response to 1-aminocyclopropane-1-carboxylic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 462 aa
Download sequence Send
to blast |
MAHDSSGSAI YPMTSMAFSN TNASDEGRSN YFEFKPYVGP NMVPADLSHR KGEQFSEVQG 60 QPQPFTAPPM TKMEISVMSN DLSRSTQMDT HTVASGVSVP EANGDEINHS LNTNSRVQAP 120 QSDPKGSGIP VVSDRLSDDG YNWRKYGQKH VKGSEFPRSY YKCTHPNCEV KKLFERSHDG 180 QITDIIYKGT HDHPKPQPSR RYSASASMNV QEDGTDKPSS LPGQDDRSCS MYAQTMHTIE 240 PNGTTDPSMP ANDRITEGAG TTLPCKNHDE VDDDDIYLKR RKMELGGFDV CPMVKPIREP 300 RVVVQTLSEV DILDDGYRWR KYGQKVVRGN PNPRSYYKCT NVGCPVRKHV ERASHDPKAV 360 ITTYEGKHNH DVPTAKTSSH DVTGPSTIPS SRYRLEESDT ISLDLGVGIG TGGENRSNEY 420 RQALHSQLVE NRAPSGNFNF EVVQENSAPT YFGVLNRSVI N*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984017 | 0.0 | GU984017.1 Cucumis sativus WRKY protein (WRKY17) mRNA, complete cds. |